Luận án Tiến sĩ Sinh học Nghiên cứu tạo chủng vi khuẩn vibrio parahaemolyticus đột biến giảm độc lực nhằm phát triển vắc - Xin phòng bệnh hoại tử gan thận trên một số loài cá biển

Nguyễn Thị Thanh Thùy và cộng sự (2013) tiêm vắc-xin V. parahaemolyticus bất hoạt có bổ sung chất bổ trợ (FIA) cho cá mú chấm cam (E. coioides) cũng tạo được phản ứng bảo hộ khá tốt. Cụ thể là, ở 30 ngày sau khi tiêm chủng, cá được tiêm công cường độc bằng V. parahaemolyticus gây bệnh đạt tỉ lệ bảo hộ (RPS) là 87,5%; trong khi mẫu cá đối chứng không tiêm tỉ lệ cá chết lên đến 70 - 90%. Tuy nhiên, tỉ lệ bảo hộ ghi nhận ở cá tiêm vắc-xin giảm nhanh, sau 2 tháng tiêm chủng tỉ lệ bảo hộ còn 41,1% [147]. Mặc dù các chủng vi khuẩn bất hoạt thường được sử dụng để sản xuất vắc-xin thương mại cho cá bởi tính an toàn của chúng. Tuy nhiên, vắc-xin bất hoạt có thời gian bảo hộ cho cơ thể cá không được dài [140]. Ngược lại, vắc-xin sống, nhược độc được đánh giá là có hiệu quả hơn trong việc tạo ra các đáp ứng miễn dịch cũng như về thời gian miễn dịch cho cơ thể cá [148]. Những kết quả của chúng tôi chứng minh hướng nghiên cứu tạo ra các chủng V. parahaemolyticus kháng rifampicin giảm độc lực phục vụ sản xuất vắc-xin cho cá có thể là một cách tiếp cận hiệu quả, có tính khả thi cao. Dòng vi khuẩn đột biến, giảm độc lực L4650 có tính ổn định độc lực cao, có tính an toàn, có khả năng tạo đáp ứng miễn dịch cho cá sau 15 ngày tiêm chủng, đồng thời, độ dài miễn dịch được tạo ra là dài, có đầy đủ những tính chất để làm nguyên liệu sản xuất vắc-xin phòng bệnh hoại tử gan thận trên cá biển

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(2009), "Identification of Vibrio parahaemolyticus isolates by PCR targeted to the toxR gene and detection of virulence genes", International Food Research Journal, 16, pp. 289-296. 183. https://www.gso.gov.vn/default.aspx?tabid=382&idmid=2&ItemID=19036 184. https://tongcucthuysan.gov.vn/portals/0/bn%20tin%20thy%20sn%2027- 07%20-%202017.pdf 185. https://tongcucthuysan.gov.vn/portals/0/bn%20tin%20thy%20sn%20tin%no ng%2017-08-2017.pdf 186. https://bnews.vn/da-tim-ra-nguyen-nhan-ca-chet-tren-song-cha- va/53608.html 187. https://www.gso.gov.vn/default.aspx?tabid=621&ItemID=19037 139 PHỤ LỤC Phụ lục 1: Trình tự gen toxR của các chủng vi khuẩn Chủng Trình tự gen toxR LBT6 ATGACTAACATCGGCACCAAATTTCTACTTGCTCAAAGGTTTACC TTTGATCCAAATAGTAATTCGCTCGCTGACCAACAAAGCGGCAA CGAAGTTGTACGATTAGGAAGCAACGAAAGCCGTATACTCCTGA TGTTGGCGGAGAGACCAAACGAAGTTTTAACCCGTAACGAGCTT CACGAGTTTGTTTGGCGTGAGCAAGGTTTTGAGGTGGATGACTC AAGCCTGACTCAAGCGATTTCTACTCTGCGTAAGATGTTGAAGG ATTCAACCAAATCTCCAGAGTTTGTTAAAACCGTTCCAAAACGA GGCTATCAACTCATTTGTACTGTTGAACGCCTAAGCCCGCTTTCT TCAGACTCAAGCTCAATTGAAGTTGAAGAACCTGCTTCTGATAA CAATGACGCCTCTGCTAATGAGGTAGAAACGATCGTAGAGCCGC CTTTAGCGACGTCTTCTGACGCAATCGTTGAACCAGAAGCGCCA GTAGTACCTGAAAAAGCACCTGTGGCTTCTGCTGTGAATCCTTG GATTCCACGCGTTATTTTATTTTTGGCACTATTACTACCGATTTG CGTACTGCTGTTTACAAACCCAGCGGAATCTCAGTTCCGTCAGA TTGGTGAGTATCAGAACGTACCAGTGATGACACCTGTAAATCAC CCGCAAATCAACAACTGGCTGCCTTCTATTGAGCAGTGCATTGA ACGCTACGTTAAGCACCATGCAGAAGACTCGTTACCAGTGGAAG TGATTGCCACTGGCGGACAAAATAACCAGCTGATTTTGAACTAC ATTCATGACAGTAACCACTCGTATGAGAACGTGACATTGCGTAT TTTCGCAGGTCAAAATGATCCAACAGATATCTGCAAATAA A3.3 ATGACTAACATCGGCACCAAATTTCTACTTGCTCAAAGGTTTACC TTTGATCCAAATAGTAATTCGCTCGCTGACCAACAAAGCGGCAA CGAAGTTGTACGATTAGGAAGCAACGAAAGCCGTATACTCCTGA TGTTGGCGGAGAGACCAAACGAAGTTTTAACCCGTAACGAGCTT CACGAGTTTGTTTGGCGTGAGCAAGGTTTTGAGGTGGATGACTC AAGCCTGACTCAAGCGATTTCTACTCTGCGTAAGATGTTGAAGG ATTCAACCAAATCTCCAGAGTTTGTTAAAACCGTTCCAAAACGA GGCTATCAACTCATTTGTACTGTTGAACGCCTAAGCCCGCTTTCT TCAGACTCAAGCTCAATTGAAGTTGAAGAACCTGCTTCTGATAA CAATGACGCCTCTGCTAATGAGGTAGAAACGATCGTAGAGCCGC CTTTAGCGACGTCTTCTGACGCAATCGTTGAACCAGAAGCGCCA GTAGTACCTGAAAAAGCACCTGTGGCTTCTGCTGTGAATCCTTG GATTCCACGCGTTATTTTATTTTTGGCACTATTACTACCGATTTG 140 CGTACTGCTGTTTACAAACCCAGCGGAATCTCAGTTCCGTCAGA TTGGTGAGTATCAGAACGTACCAGTGATGACACCTGTAAATCAC CCGCAAATCAACAACTGGCTGCCTTCTATTGAGCAGTGCATTGA ACGCTACGTTAAGCACCATGCAGAAGACTCGTTACCAGTGGAAG TGATTGCCACTGGCGGACAAAATAACCAGCTGATTTTGAACTAC ATTCATGACAGTAACCACTCGTATGAGAACGTGACATTGCGTAT TTTCGCAGGTCAAAATGATCCAACAGATATCTGCAAATAA B3.13 ATGACTAACATCGGCACCAAATTTCTACTTGCTCAAAGGTTTACC TTTGATCCAAATAGTAATTCGCTCGCTGACCAACAAAGCGGCAA CGAAGTTGTACGATTAGGAAGCAACGAAAGCCGTATACTCCTGA TGTTGGCGGAGAGACCAAACGAAGTTTTAACCCGTAACGAGCTT CACGAGTTTGTTTGGCGTGAGCAAGGTTTTGAGGTGGATGACTC AAGCCTGACTCAAGCGATTTCTACTCTGCGTAAGATGTTGAAGG ATTCAACCAAATCTCCAGAGTTTGTTAAAACCGTTCCAAAACGA GGCTATCAACTCATTTGTACTGTTGAACGCCTAAGCCCGCTTTCT TCAGACTCAAGCTCAATTGAAGTTGAAGAACCTGCTTCTGATAA CAATGACGCCTCTGCTAATGAGGTAGAAACGATCGTAGAGCCGC CTTTAGCGACGTCTTCTGACGCAATCGTTGAACCAGAAGCGCCA GTAGTACCTGAAAAAGCACCTGTGGCTTCTGCTGTGAATCCTTG GATTCCACGCGTTATTTTATTTTTGGCACTATTACTACCGATTTG CGTACTGCTGTTTACAAACCCAGCGGAATCTCAGTTCCGTCAGA TTGGTGAGTATCAGAACGTACCAGTGATGACACCTGTAAATCAC CCGCAAATCAACAACTGGCTGCCTTCTATTGAGCAGTGCATTGA ACGCTACGTTAAGCACCATGCAGAAGACTCGTTACCAGTGGAAG TGATTGCCACTGGCGGACAAAATAACCAGCTGATTTTGAACTAC ATTCATGACAGTAACCACTCGTATGAGAACGTGACATTGCGTAT TTTCGCAGGTCAAAATGATCCAACAGATATCTGCAAATAA Phụ lục 2: Trình tự gen tlh của các chủng/dòng vi khuẩn Chủng/ dòng Trình tự gen tlh LBT6 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC 141 ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA L3900 ATGAAAAAAACAATCACACTATTAACTGCATTATTCCCGGTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGGTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC 142 AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTCTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA L4200 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT 143 GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAAAT TAGCCGCAGTACCGTTCATA L4650 ATGAAAAAAACAATCCCACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAAAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGTTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCATCAAAGTGGTT GCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACGC ATCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGTC ACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGCG AAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGCGCGGCTGG TGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAAGTTT CTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACCA GCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCATG AACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAGA AGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATGT TGATGACGGTGCCAGATGTGACGTAAGCACCTCAGTTTAAGTAC TCACCACAAGAAGAGATCGACAAAATTCGTGAGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGCTGTTTGATACTCACGCCCTGTTTGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCAGCGTCTGGTGCT GAGAAGTTTGTGTTCTGGGATGTCACGCATCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCAGAGTACCGTTTCTAA A3.3 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC 144 ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCAA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA A400 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC 145 AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGACCACGGTTTCGTGAACGCAA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCAATTACA TGGACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCTCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA A650 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAAAAAACACGGTTTCGTGAACGCAAG TGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACAT GTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCTG 146 AGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAACT CACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACTT AGCACGAGTAACCGTTTAAT B3.13 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA B5700 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC 147 ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA B7050 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTATACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC 148 AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTGAATGACTTCAT GAACTACAACCGTGGCTTTCCAGAAGTGAAAGCGGAATATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCAACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA B7900 ATGAAAAAAACAATCACACTATTAACTGCATTACTCCCGCTTGC TTCTGCAGTTGCCGAAGAGCCAACCTTATCACCAGAAATGGTTT CAGCGTCTGAAGTGATCAGCACGCAAGAAAACCAAACCTATACC TATGTTCGCTGTTGGTATCGCACCAGCTACTCGAAAGATGATCC GGCGACCGATTGGGAATGGGCAAAAAACGAAGATGGTAGCTAC TTCACCATTGACGGCTACTGGTGGAGCTCCGTTTCATTTAAAAAC ATGTTCTACACCAACACGTCGCAAAACGTTATCCGTCAGCGTTG TGAAGCAACATTAGATTTGGCGAACGAGAACGCAGACATTACGT TCTTCGCCGCTGACAATCGCTTCTCATACAACCACACGATCTGGA GCAACGACGCAGCAATGCAGCCAGATCAAATCAACAAAGTGGT TGCACTCGGTGACAGCTTGTCTGATACAGGCAACATCTTTAACG CGTCACAATGGCGCTTCCCTAACCCGAACAGCTGGTTCTTAGGT CACTTCTCCAACGGTTTTGTGTGGACAGAATACATTGCCAAAGC GAAGAACCTTCCGCTCTACAACTGGGCAGTTGGCGGTGCGGCTG GTGAGAACCAATACATCGCGCTAACAGGGGTTGGTGAGCAGGTT TCTTCGTACTTAACCTACGCAAAACTGGCGAAGAACTACAAACC AGCAAACACCTTGTTTACGCTTGAGTTTGGTTTTAATGACTTCAT GAACTACAACCGTGGCGTTCCAGAAGTGAAAGCGGATTATGCAG AAGCACTGATTCGTTTGACGGACGCAGGTGCGAAGAACTTCATG TTGATGACACTGCCAGATGCGACGAAAGCGCCTCAGTTTAAGTA CTCAACACAAGAAGAGATCGACAAAATTCGTGCGAAAGTGCTTG AGATGAACGAGTTCATCAAGGCACAAGCGATGTACTACAAAGC GCAAGGTTACAACATCACGTTGTTTGATACTCACGCCTTGTTCGA GACGCTAACTTCTGCGCCAGAAGAGCACGGTTTCGTGAACGCGA GTGATCCTTGTTTGGACATCAACCGCTCATCGTCTGTCGATTACA TGTACACCCACGCATTGCGCTCTGAGTGTGCGGCGTCCGGTGCT 149 GAGAAATTTGTGTTCTGGGATGTCACGCACCCAACAACAGCAAC TCACCGCTATGTTGCAGAGAAAATGCTAGAAAGTAGCAACAACT TAGCCGAGTACCGTTTCTAA Phụ lục 3. Trình tự chuỗi polypeptide suy diễn từ gen tlh các chủng/dòng vi khuẩn Chủng/ dòng Trình tự polypeptide suy diễn các chủng/dòng vi khuẩn LBT6 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* L3900 MKKTITLLTALFPVASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* L4200 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV 150 DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NKLAAVPFI L4650 MKKTIPLLTALLPLASAVAEKPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQIIKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTVPDVT*APQFKYSPQEEIDKIREKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* A3.3 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* A400 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEDHGFVNASDPCLDINRSSS VNYMDTHALRSECAASGAEKFVFWDVTHPTTATHLYVAEKMLES SNNLAEYRF* A650 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA 151 MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPKNTVS*TQVILVWTSTAHRL SITCTPTHCALSVRRPVLRNLCSGMSRTQQQQLTAMLQRKC*KVAT T*HE*PFN B3.13 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* B7050 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMLY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGLNDFMNYNRGFPEVKAEYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS NNLAEYRF* B7900 MKKTITLLTALLPLASAVAEEPTLSPEMVSASEVISTQENQTYTYVR CWYRTSYSKDDPATDWEWAKNEDGSYFTIDGYWWSSVSFKNMFY TNTSQNVIRQRCEATLDLANENADITFFAADNRFSYNHTIWSNDAA MQPDQINKVVALGDSLSDTGNIFNASQWRFPNPNSWFLGHFSNGFV WTEYIAKAKNLPLYNWAVGGAAGENQYIALTGVGEQVSSYLTYA KLAKNYKPANTLFTLEFGFNDFMNYNRGVPEVKADYAEALIRLTD AGAKNFMLMTLPDATKAPQFKYSTQEEIDKIRAKVLEMNEFIKAQA MYYKAQGYNITLFDTHALFETLTSAPEEHGFVNASDPCLDINRSSSV DYMYTHALRSECAASGAEKFVFWDVTHPTTATHRYVAEKMLESS 152 NNLAEYRF* Phụ lục 4: Trình tự nucleotide đoạn gen rpoB của chủng/dòng vi khuẩn Chủng/ dòng Trình tự nucleotide đoạn gen rpoB của chủng/dòng vi khuẩn LBT6 AGCCACCAACAAAAGAAGCTGCAGAAGCACTATTCGAAAGCCT ATTCTTCTCTGAAGAGCGTTACGATCTATCGACTGTTGGTCGTAT GAAGTTTAATAGCTCTATCGGTCGTGAAGATGCTCAAGAGCAAG GCACACTTGATGAAACAGATATCATCGAAGTGATGAAGAAGCTT ATCGCGATCCGTAACGGCAAAGGCGAAGTGGACGATATCGACCA CCTAGGCAACCGTCGTATCCGTTCTGTCGGCGAAATGGCTGAGAA CCAGTTCCGTGTAGGTCTAGTACGTGTTGAGCGTGCAGTTAAAGA GCGTCTAAGCCTAGGCGATCTTGACGCAATCATGCCTCAAGACCT GATCAACGCGAAGCCAATTTCTGCAGCGGTTAAAGAATTCTTTGG CTCTTCACAGCTTTCACAGTTCATGGACCAAAACAACCCGCTGTC AGAAGTAACGCACAAGCGTCGTATTTCTGCATTGGGTCCTGGCGG TCTGACTCGTGAACGTGCTGGCTTCGAAGTTCGAGACGTACACGT AACTCACTACGGTCGTCTATGTCCTATCGAAACGCCGGAAGGTCC AAACATCGGTCTGATCAACTCTCTATCTGCGTTTGCGCGTTGTAA CGAGTACGGTTTCCTTGAGACGCCATACCGTCGCGTTGTAGATGG TGTTGTAACAGACGAAGTAGATTACCTATCTGCAATCGAAGAAG GCCAATTCGTTATCGCTCAGGCGAACGCTAAGCTAAACGAAGAT GGTACTTTTGCAGATGAGCTGATCACAGCTCGTCAGAAAGGTGA ATCTGGTCTACACCCTCGTGAGCACGCTCAGTACATGGACGTTGC GACAAACCAGGTTGTATCTATCGCTGCATCGCTTATCCCGTTCCT AGAACACGATGATGCGAACCGTGCATTGATGGGTGCGA L4650 ACTATTCGAAAACCTGTTCTTCTCCGAAGACCGCTACGATCTCTC CGCTGTTGGTCGTATGAAGTTCAACAGCTCTATCGGTCGTGACG ATGCTGAAGAGCAAGGTACACTGGATAAAGAAGACATCATCGA AGTGATGAAGAAGCTCATCGATATCCGTAACGGTAAAGGCGAA GTGGACGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGT AGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCCTGGTACGTG TAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTGGGCGATCTGGAT GCAATCATGCCTCAGGATATGATCAACGCCAAGCCGATCTCCGC AGCAGTGAAAGAGTTCTTTGGTTCCAGCCAGCTGTCTCAGTTTAT GGACCAGAACAACCCGCTGTCTGAGATCACGCACAAGCGTCGTA TCTCTGCACTCGGCCCAGGCGGTCTGACCCGTGAGCGCGCAGGC 153 TTCGAAGTTCGAGACGTACACGTAACCCACTACGGTCGCGTATG TCCAATCGAAACGCCTGAAGGTCCAAACATCGGTCTGATCAACT CCCTGTCCGTGTACGCACGTTGTAACGAATACGGCTTCCTCGAG ACCCCGTACCGTCGCGTGGTAGACGGTGTTGTAACCGACGAAGT ACACTACCTGTCTGCTATCGAAGAAGGTCAATACGTTATCGCCC AGGCGAACACCAACCTGGACGAAGAAGGTACTTTTGCAGATGA CCTCGTTACAGCCCGTCAGAAAGGTGAATCCAGCTTACTCCCTC GTGACCAGGTTCAGTACATGGACGTTTCCACCAACCAGGTGGTT TCCGTCGGTGCGTCCCTGATCCCGTTCCTGGAACACGATGACGC CAACC B3.13 ATCTACCGTATGATGCGCCCTGGTGAGCCACCAACAAAAGAAGC TGCAGAAGCACTATTCGAAAGCCTATTCTTCTCTGAAGAGCGTT ACGATCTATCGACTGTTGGTCGTATGAAGTTTAATAGCTCTATCG GTCGTGAAGATGCTCAAGAGCAAGGCACACTTGATGAAACAGA TATCATCGAAGTGATGAAGAAGCTTATCGCGATCCGTAACGGCA AAGGCGAAGTGGACGATATCGACCACCTAGGCAACCGTCGTATC CGTTCTGTCGGCGAAATGGCTGAGAACCAGTTCCGTGTAGGTCT AGTACGTGTTGAGCGTGCAGTTAAAGAGCGTCTAAGCCTAGGCG ATCTTGACGCAATCATGCCTCAAGACCTGATCAACGCGAAGCCA ATTTCTGCAGCGGTTAAAGAATTCTTTGGCTCTTCACAGCTTTCA CAGTTCATGGACCAAAACAACCCGCTGTCAGAAGTAACGCACAA GCGTCGTATTTCTGCATTGGGTCCTGGCGGTCTGACTCGTGAACG TGCTGGCTTCGAAGTTCGAGACGTACACGTAACTCACTACGGTC GTCTATGTCCTATCGAAACGCCGGAAGGTCCAAACATCGGTCTG ATCAACTCTCTATCTGCGTTTGCGCGTTGTAACGAGTACGGTTTC CTTGAGACGCCATACCGTCGCGTTGTAGATGGTGTTGTAACAGA CGAAGTAGATTACCTATCTGCAATCGAAGAAGGCCAATTCGTTA TCGCTCAGGCGAACGCTAAGCTAAACGAAGATGGTACTTTTGCA GATGAGCTGATCACAGCTCGTCAGAAAGGTGAATCTGGTCTACA CCCTCGTGAGCACGCTCAGTACATGGACGTTGCGACAAACCAGG TTGTATCTATCGCTGCATCGCTTATCCCGTTCCTAGAACACGATG ATGCGAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCA GTTCCAA A3.3 TGATGCGCCCTGGTGAGCCACCAACAAAAGAAGCTGCAGAAGC ACTATTCGAAAGCCTATTCTTCTCTGAAGAGCGTTACGATCTATC GACTGTTGGTCGTATGAAGTTTAATAGCTCTATCGGTCGTGAAG ATGCTCAAGAGCAAGGCACACTTGATGAAACAGATATCATCGAA GTGATGAAGAAGCTTATCGCGATCCGTAACGGCAAAGGCGAAGT GGACGATATCGACCACCTAGGCAACCGTCGTATCCGTTCTGTCGG 154 CGAAATGGCTGAGAACCAGTTCCGTGTAGGTCTAGTTCGTGTTGA GCGTGCAGTTAAAGAGCGTCTGAGTCTGGGCGACCTTGATGCGAT CATGCCTCAAGACCTGATCAATGCGAAACCAATTTCTGCAGCGGT TAAAGAATTCTTTGGCTCTTCACAGCTTTCACAGTTCATGGACCA AAACAACCCGTTATCAGAAGTAACGCACAAGCGTCGTATTTCTGC ATTGGGTCCTGGCGGTCTAACTCGTGAACGTGCTGGCTTCGAAGT TCGAGACGTACACGTAACTCACTACGGCCGTCTATGTCCTATCGA AACGCCGGAAGGTCCAAACATCGGTCTGATCAACTCTCTATCTGC GTTTGCGCGTTGTAACGAGTACGGTTTCCTTGAGACGCCATACCG TCGCGTTGTAGATGGTGTTGTAACAGACGAAGTAGATTACCTATC TGCAATCGAAGAAGGCCAATTCGTTATCGCTCAGGCGAACGCTA AGCTAAACGAAGATGGTACTTTTGCAGATGAGCTGATCACAGCTC GTCAGAAAGGTGAATCTGGTCTACATCCTCGTGAGCACGCTCAGT ACATGGACGTTGCGACAAACCAGGTTGTATCTATCGCTGCATCGC TTATCCCGTTCCTAGAACACGATGATGCGAACC A650 TGATGCGCCCTGGTGAGCCACCAACAAAAGAAGCTGCAGAAGC ACTATTCGAAAGCCTATTCTTCTCTGAAGAGCGTTACGATCTATC GACTGTTGGTCGTATGAAGTTTAATAGCTCTATCGGTCGTGAAG ATGCTCAAGAGCAAGGCACACTTGATGAAACAGATATCATCGAA GTGATGAAGAAGCTTATCGCGATCCGTAACGGCAAAGGCGAAG TGGACGATATCGACCACCTAGGCAACCGTCGTATCCGTTCTGTC GGCGAAATGGCTGAGAACCAGTTCCGTGTAGGTCTAGTACGTGT TGAGCGTGCAGTTAAAGAGCGTCTAAGCCTAGGCGATCTTGACG CAATCATGCCTCAAGACCTGATCAACGCGAAGCCAATTTCTGCA GCGGTTAAAGAATTCTTTGGCTCTTCACAGCTTTCACCGTTCATG GACCAAAACAACCCGCTGTCAGAAGTAACGCACAAGCGTCGTAT TTCTGCATTGGGTCCTGGCGGTCTGACTCGTGAACGTGCTGGCTT CGAAGTTCGAGACGTACACGTAACTCACTACGGTCGTCTATGTC CTATCGAAACGCCGGAAGGTCCAAACATCGGTCTGATCAACTCT CTATCTGCGTTTGCGCGTTGTAACGAGTACGGTTTCCTTGAGACG CCATACCGTCGCGTTGTAGATGGTGTTGTAACAGACGAAGTAGA TTACCTATCTGCAATCGAAGAAGGCCAATTCGTTATCGCTCAGG CGAACGCTAAGCTAAACGAAGATGGTACTTTTGCAGATGAGCTG ATCACAGCTCGTCAGAAAGGTGAATCTGGTCTACACCCTCGTGA GCACGCTCAGTACATGGACGTTGCGACAAACCAGGTTGTATCTA TCGCTGCATCGCTTATCCCGTTCCTAGAACACGATGATGCGAAC C 155 Phụ lục 5: Trình tự chuỗi polypeptide suy diễn từ đoạn gen rpoB Chủng/ dòng Trình tự chuỗi polypeptide suy diễn từ đoạn gen rpoB LBT6 PGEPPTKEAAEALFESLFFSEERYDLSTVGRMKFNSSIGREDAQEQG TLDETDIIEVMKKLIAIRNGKGEVDDIDHLGNRRIRSVGEMAENQFR VGLVRVERAVKERLSLGDLDAIMPQDLINAKPISAAVKEFFGSSQLS QFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGR LCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVTDEVD YLSAIEEGQFVIAQANAKLNEDGTFADELITARQKGESGLHPREHA QYMDVATNQVVSIAASLIPFLEHDDANRALMGANMHR L4650 LFENLFFSEDRYDLSAVGRMKFNSSIGRDDAEEQGTLDKEDIIEVMK KLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVK ERLSLGDLDAIMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSE ITHKRRISALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIG LINSLSVYARCNEYGFLETPYRRVVDGVVTDEVHYLSAIEEGQYVI AQANTNLDEEGTFADDLVTARQKGESSLLPRDQVQYMDVSTNQV VSVGASLIPFLEHDDAN A3.3 MRPGEPPTKEAAEALFESLFFSEERYDLSTVGRMKFNSSIGREDAQE QGTLDETDIIEVMKKLIAIRNGKGEVDDIDHLGNRRIRSVGEMAEN QFRVGLVRVERAVKERLSLGDLDAIMPQDLINAKPISAAVKEFFGSS QLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTH YGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVTD EVDYLSAIEEGQFVIAQANAKLNEDGTFADELITARQKGESGLHPRE HAQYMDVATNQVVSIAASLIPFLEHDDAN A650 MRPGEPPTKEAAEALFESLFFSEERYDLSTVGRMKFNSSIGREDAQE QGTLDETDIIEVMKKLIAIRNGKGEVDDIDHLGNRRIRSVGEMAEN QFRVGLVRVERAVKERLSLGDLDAIMPQDLINAKPISAAVKEFFGSS QLSPFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHY GRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVTDE VDYLSAIEEGQFVIAQANAKLNEDGTFADELITARQKGESGLHPRE HAQYMDVATNQVVSIAASLIPFLEHDDAN 156 Phụ lục 6: So sánh trình tự gen toxR của chủng V. parahaemolyticus A3.3 và B3.13 với các trình tự trên NCBI bằng công cụ BLAST Chủng A3.3 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus CDC_K4557 1618 100 0,0 99,89 CP006008.1 2 V. parahaemolyticus BB22OP 1618 100 0,0 99,89 CP003972.1 3 V. parahaemolyticus FORC_072 1591 100 0,0 99,32 CP013472.1 4 V. parahaemolyticus R13 1591 100 0,0 99,32 CP028342.1 5 V. parahaemolyticus R14 1591 100 0,0 99,32 CP028341.1 6 V. parahaemolyticus toxR and toxS genes 1591 100 0,0 99,32 L11929.1 7 V. parahaemolyticus MVP1 1585 100 0,0 99,20 CP043421.1 8 V. parahaemolyticus ATCC 17802 1585 100 0,0 99,20 AY527396.1 50 V. parahaemolyticus S107-1 1552 100 0,0 98,52 CP028481.1 100 V. parahaemolyticus Vp2010-008 toxR 948 60 0,0 98,87 KT194122.1 Chủng B3.13 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus CDC_K4557 1618 100 0,0 99,89 CP006008.1 2 V. parahaemolyticus BB22OP 1618 100 0,0 99,89 CP003972.1 3 V. parahaemolyticus FORC_072 1591 100 0,0 99,32 CP013472.1 4 V. parahaemolyticus R13 1591 100 0,0 99,32 CP028342.1 5 V. parahaemolyticus R14 1591 100 0,0 99,32 CP028341.1 6 V. parahaemolyticus toxR and toxS genes 1591 100 0,0 99,32 L11929.1 7 V. parahaemolyticus MVP1 1585 100 0,0 99,20 CP043421.1 8 V. parahaemolyticus ATCC 17802 1585 100 0,0 99,20 AY527396.1 157 50 V. parahaemolyticus FORC-004 1552 100 0,0 98,52 CP028481.1 100 V. parahaemolyticus Vp2010-068 toxR 948 60 0,0 98,87 KT194123.1 Phụ lục 7: So sánh trình tự gen tlh của chủng V. parahaemolyticus A3.3, B3.13 với các trình tự trên NCBI bằng công cụ BLAST Chủng A3.3 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus FORC_006 2300 100 0,0 99,76 CP009766.1 2 V. parahaemolyticus FORC-023 CP012951.1 3 V. parahaemolyticus 160807 2278 100 0,0 99,44 CP033142.1 4 V. parahaemolyticus FORC-071 2272 100 0,0 99,36 CP023486.1 5 V. parahaemolyticus UCM-V493 2266 100 0,0 99,28 CP007005.1 6 V. parahaemolyticus MVP1 2255 100 0,0 99,12 CP043422.1 7 V. parahaemolyticus S107-1 2255 100 0,0 99,12 CP028482.1 8 V. parahaemolyticus VH12 2255 100 0,0 99,12 KT948112.1 9 V. parahaemolyticus Vp-18 2255 100 0,0 99,12 JF513048.1 10 V. parahaemolyticus Vb0624 2250 100 0,0 99,04 CP041201.1 44 V. parahaemolyticus 1682 1552 100 0,0 89,00 CP012095.1 97 V. parahaemolyticus TBW-9-11-1 802 35 0,0 98,89 JX262952.1 100 V. harveyi VIB647 800 92 0,0 79,13 DQ224369.1 Chủng B3.13 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus FORC_006 2300 100 0,0 99,76 CP009766.1 2 V. parahaemolyticus FORC-023 CP012951.1 158 3 V. parahaemolyticus 160807 2278 100 0,0 99,44 CP033142.1 4 V. parahaemolyticus FORC-071 2272 100 0,0 99,36 CP023486.1 5 V. parahaemolyticus UCM-V493 2266 100 0,0 99,28 CP007005.1 6 V. parahaemolyticus MVP1 2261 100 0,0 99,20 CP031782.1 7 V. parahaemolyticus VPD14 2261 100 0,0 99,20 CP028482.1 8 V. parahaemolyticus 20130629002S01 2261 100 0,0 99,20 CP028482.1 42 V. parahaemolyticus VP1.1997 2135 94 0,0 99,16 KT948114.1 97 V. parahaemolyticus TBW-9-11-1 808 35 0,0 99,11 JX262952.1 100 V. diabolicusi JPW-8-11-8 802 35 0,0 98,89 JX262986.1 Phụ lục 8: So sánh trình tự gen rpoB của chủng V. parahaemolyticus A3.3, B3.13 với các trình tự trên NCBI bằng công cụ BLAST Chủng A3.3 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus FDAARGOS_51 1701 100 0,0 99,78 CP026041.1 2 V. parahaemolyticus MAVP-26 1701 100 0,0 99,78 CP0232248.1 3 V. parahaemolyticus CHN25 1690 100 0,0 99,57 CP010883.1 4 V. parahaemolyticus HA2 1685 100 0,0 99,46 CP023710.1 5 V. parahaemolyticus VN-10092 1657 100 0,0 98,92 KJ647551.1 6 V. parahaemolyticus ATCC 17802 1688 99 0,0 98,64 CP014046.1 7 V. parahaemolyticus BB22OP 1640 100 0,0 98,60 CP003972.1 50 V. parahaemolyticus VN-2815 1629 100 0,0 98,38 KJ647561.1 100 V. parahaemolyticus VN-4027 1616 100 0,0 98,06 KJ648147.1 159 Chủng B3.13 STT Chủng Tổng số điểm Tỉ lệ che phủ (%) Giá trị kì vọng Độ tương đồng (%) Số hiệu gen 1 V. parahaemolyticus ATCC17802 1792 100 0,0 99,69 CP014046.2 2 V. parahaemolyticus UCM-V493 1792 100 0,0 99,69 CP007004.1 3 V. parahaemolyticus FORC_006 1781 100 0,0 94,49 CP009765.1 4 V. parahaemolyticus VN-3112 1764 98 0,0 99,69 KJ647744.1 5 V. parahaemolyticus 17802 1764 98 0,0 99,69 EU909181.1 6 V. parahaemolyticus VN-4004 1755 98 0,0 98,48 JK647843.1 50 V. parahaemolyticus SO150 1703 100 0,0 98,06 HQ533927.1 100 V. parahaemolyticus VN-4019 1679 98 0,0 98,02 KJ648140.1 Phụ lục 9: Cấu trúc bậc 2 của TLH ở các chủng/dòng vi khuẩn 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179

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